publications

publications by categories in reversed chronological order. generated by jekyll-scholar.

2025

  1. Expert advice from ResearchMatch volunteers: Recruitment Innovation Center use cases and innovation
    Maeve Tischbein, Sarah K Cook, Cathy Shyr, and 8 more authors
    Journal of Clinical and Translational Science, 2025
  2. Reply to Layne et al.’s Letter to the Editor
    Cathy Shyr and Paul A Harris
    Journal of the American Medical Informatics Association, 2025
  3. O27: Leveraging electronic health records to characterize growth patterns and curves in individuals with genetic disease
    Cathy Shyr, Rory Tinker, John Phillips, and 1 more author
    Genetics in Medicine Open, 2025
  4. Sex-Specific Diagnostic Inequality in Fabry Disease: Lessons Learned from Analysis of Newborn Screening and Cascade Testing in Tennessee from 2017 to 2024
    Yutaka Furuta, Neena S Agrawal, Natalie N Owen, and 8 more authors
    Available at SSRN 5337995, 2025

2024

  1. Identifying and extracting rare diseases and their phenotypes with large language models
    Cathy Shyr, Yan Hu, Lisa Bastarache, and 4 more authors
    Journal of healthcare informatics research, 2024
  2. Impact of financial compensation on enrollment and participation in a remote, mobile-app based research study
    Shelby Meier, Alex Cheng, Maeve Tischbein, and 6 more authors
    Journal of Clinical and Translational Science, 2024
  3. Illuminating the landscape of high-level clinical trial opportunities in the All of Us Research Program
    Cathy Shyr, Lina Sulieman, and Paul A Harris
    Journal of the American Medical Informatics Association, 2024
  4. A phase I study of ATR inhibitor BAY1895344 (elimusertib) plus topotecan (ETCTN 10402): Results of dose escalation.
    Shannon Stockton, Cathy Shyr, Michael Cecchini, and 8 more authors
    2024
  5. A phase I study of irinotecan combined with BAY1895344 (ATR inhibitor) in advanced solid tumors: Results of ETCTN 10402 dose escalation.
    Thatcher Ross Heumann, Shannon Stockton, Michael Cecchini, and 8 more authors
    2024
  6. Leveraging artificial intelligence to summarize abstracts in lay language for increasing research accessibility and transparency
    Cathy Shyr, Randall W Grout, Nan Kennedy, and 8 more authors
    Journal of the American Medical Informatics Association, 2024
  7. Empowering the biomedical research community: Innovative SAS deployment on the All of Us Researcher Workbench
    Izabelle Humes, Cathy Shyr, Moira Dillon, and 8 more authors
    Journal of the American Medical Informatics Association, 2024

2023

  1. Multi-study r-learner for heterogeneous treatment effect estimation
    Cathy Shyr, Boyu Ren, Prasad Patil, and 1 more author
    arXiv preprint arXiv:2306.01086, 2023
  2. Multi-Study R-Learner for Estimating Heterogeneous Treatment Effects Across Studies Using Statistical Machine Learning
    Cathy Shyr, Boyu Ren, Prasad Patil, and 1 more author
    arXiv preprint arXiv:2306.01086, 2023

2022

  1. Penetrance of male breast cancer susceptibility genes: a systematic review
    Reem S Chamseddine, Cathy Wang, Kanhua Yin, and 6 more authors
    Breast Cancer Research and Treatment, 2022
  2. Multi-Study Boosting: Theoretical Considerations for Merging vs. Ensembling
    Cathy Shyr, Pragya Sur, Giovanni Parmigiani, and 1 more author
    arXiv preprint arXiv:2207.04588, 2022
  3. Evaluation of Lynch syndrome risk models in a multicenter diverse population.
    Jenny Lu, Stephen Knapp, Gubidxa Gutierrez Seymour, and 8 more authors
    2022
  4. Statistical and Machine Learning Methods for Multi-Study Prediction and Causal Inference
    Cathy Wang
    Harvard University, 2022
  5. A validation of models for prediction of pathogenic variants in mismatch repair genes
    Cathy Shyr, Amanda L Blackford, Theodore Huang, and 8 more authors
    Genetics in Medicine, 2022

2021

  1. Quantitative assessment of learning behaviors for oncology providers
    Marie Wood, Thomas J George, Rami Manochakian, and 6 more authors
    Journal of Cancer Education, 2021
  2. Establishing and evaluating an ASCO learning cohort: A longitudinal project assessing the learning needs and behaviors of oncology professionals
    Rami Manochakian, Thomas J George, Marie Wood, and 6 more authors
    Journal of Cancer Education, 2021

2020

  1. A flexible nonlinear mixed effects model for HIV viral load rebound after treatment interruption
    Rui Wang, Ante Bing, Cathy Wang, and 3 more authors
    Statistics in medicine, 2020
  2. Penetrance of colorectal cancer among mismatch repair gene mutation carriers: a meta-analysis
    Cathy Wang, Yan Wang, Kevin S Hughes, and 2 more authors
    JNCI Cancer Spectrum, 2020
  3. Quantitative analysis of oncology professional learning preferences
    Thomas J George, Rami Manochakian, Marie Wood, and 7 more authors
    JCO Oncology Practice, 2020

2019

  1. Validation of a semiautomated natural language processing–based procedure for meta-analysis of cancer susceptibility gene penetrance
    Zhengyi Deng, Kanhua Yin, Yujia Bao, and 7 more authors
    JCO clinical cancer informatics, 2019
  2. Using machine learning and natural language processing to review and classify the medical literature on cancer susceptibility genes
    Yujia Bao, Zhengyi Deng, Yan Wang, and 8 more authors
    JCO Clinical Cancer Informatics, 2019

2015

  1. The Alzheimer’s Disease Neuroimaging Initiative phase 2: Increasing the length, breadth, and depth of our understanding
    Laurel A Beckett, Michael C Donohue, Cathy Wang, and 5 more authors
    Alzheimer’s & Dementia, 2015